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nsclc

Homo sapiens · lung · scRNA-seq · 6122 cells · 14 clusters · UMAP · source: tidx package (20213 genes, cluster col seurat_clusters)

Used by 🗂 nsclc — single-cell data report

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Clusters

idlabelcellstop markersevidence
0 B cell curated 2271 MS4A1 CD79A BANK1 CD19 LINC00926 CD79B FCRLA CD37 MS4A1 CD79A CD19 CD79B
1 T cell curated 968 IL7R KLRB1 CD3E IL32 CD3D GIMAP4 GIMAP7 FYB IL7R CD3E CD3D CD2
2 Monocyte curated 601 S100A7 KRT17 S100A2 LCN2 SLPI S100P SAA1 KRT7 S100A9
3 CD8+ T cell curated 518 GZMK CCL5 CD8A GZMA CST7 CTSW NKG7 CCL4 GZMK CD8A CD3E
4 Monocyte curated 384 LYZ FCN1 S100A12 SERPINA1 AIF1 TYROBP CD14 CST3 LYZ FCN1 CD14 VCAN
5 Macrophages curated 304 SPP1 APOE CXCL8 PLIN2 RNASE1 APOC1 CCL2 CTSL
6 NK cell curated 278 GNLY NKG7 CCL4 GZMB XCL2 CCL5 PRF1 KLRD1 GNLY NKG7 GZMB KLRD1
7 Dendritic cell curated 204 HLA-DQB2 S100B GSN CST3 FCER1A HLA-DPA1 HLA-DQA1 HLA-DPB1 CST3 FCER1A
8 Regulatory T (Treg) cell:Liver curated 151 TNFRSF4 IL32 FOXP3 TNFRSF18 CD177 BATF CTLA4 CD7
9 B Cells curated 146 IGHA1 IGKV1-5 IGHV3-23 IGKV4-1 IGKV1-12 IGKC JCHAIN IGLV2-14
10 Mast Cells curated 142 TPSAB1 TPSB2 CPA3 TPSD1 HPGD MS4A2 CLU HPGDS
11 CD8+ T cell curated 69 GZMK RCSD1 MS4A1 CD79A KLRG1 KIAA1033 BANK1 FYB GZMK
12 Plasmacytoid DC curated 43 PTGDS GZMB IRF7 RASD1 CLIC3 TCL1A LILRA4 SERPINF1 IRF7 LILRA4
13 Proliferating cell curated 43 STMN1 TUBA1B HMGB2 TUBB UBE2C HIST1H4C TYMS H2AFZ UBE2C MKI67